analysis

Now on GitHub!

Code generated in the lab is being made available through GitHub.com. Read More...

SNPMeta

SNPMeta is a Python and BioPython-based tool written by Thomas Kono. Read More...

Hudson table to F statistic analysis

This Perl script converts a Hudson table to input for heirfstat.
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polydNdS Multiple

Split sequence from multiple loci into partitions of sites. Read More...

Randomized subsampling - recombination rate estimation

A script to handle large samples of individuals for recombination rate estimation. Read More...

Bash script to run Structure

This shell script will replicate runs of Structure. Read More...

Pattern Finder

Calculate summaries of LD patterns in sets of SNPs. Read More...